Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
CBL57172.16 Protein of unknown function, without similarity to other proteins. (86 aa)    
Predicted Functional Partners:
CBL57171.1
Transcriptional regulator (Glycerol uptake operon antiterminator regulatory protein); In the presence of glycerol 3-phosphate, this protein is thought to enhance transcription.
       0.773
glpD2
FAD dependent oxidoreductase (Glycerol-3-phosphate dehydrogenase 2); sn-Glycerol 3-phosphate + FAD <=> Glycerone phosphate + FADH2 and sn-Glycerol 3-phosphate + Acceptor <=> Glycerone phosphate + Reduced acceptor.
       0.541
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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