STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57241.16 Protein of unknown function, without similarity to other proteins. (213 aa)    
Predicted Functional Partners:
ftsQ
Cell division protein FtsQ; Essential cell division protein.
 
 
 
 0.930
CBL57240.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.819
ppx
Ppx/GppA phosphatase family; Guanosine 3prime-diphosphate 5prime-triphosphate + H2O <=> Guanosine 3prime,5prime-bis(diphosphate) + Orthophosphate.
  
  
 0.785
CBL57260.1
Dolichyl-phosphate-mannose-protein mannosyltransferase (Glycosyl transferase, family 39).
  
     0.717
CBL55523.1
Hypothetical membrane protein.
  
     0.707
CBL55510.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.689
CBL57055.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.648
CBL57093.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.638
CBL56212.1
Hypothetical membrane protein.
  
     0.632
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.608
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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