STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galK1Galactokinase; ATP + D-Galactose <=> ADP + alpha-D-Galactose 1-phosphate; Belongs to the GHMP kinase family. GalK subfamily. (398 aa)    
Predicted Functional Partners:
galT
Galactose-1-phosphate uridylyltransferase (UDP-glucose---hexose-1-phosphate uridylyltransferase); UDP-glucose + alpha-D-Galactose 1-phosphate <=> D-Glucose 1-phosphate + UDP-D-galactose.
  
 0.971
galE3
UDP-glucose 4-epimerase.
 
 
 0.925
galE2
# UDP-glucose <=> UDP-D-galactose dTDP-glucose <=> dTDP-galactose.
 
 
 0.924
galK2
Galactokinase; ATP + D-Galactose <=> ADP + alpha-D-Galactose 1-phosphate; Belongs to the GHMP kinase family.
  
  
 
0.906
galE1
UDP-glucose = UDP-galactose.
 
 
 0.851
CBL57264.1
6 Protein of unknown function, without similarity to other proteins.
       0.773
lacZ
Beta-galactosidase (Lactase) LacZ; Lactose + H2O <=> alpha-D-Glucose + D-Galactose.
 
  
 0.749
CBL57736.1
Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
      
 0.660
CBL57447.1
Glycoside hydrolase.
 
  
 0.612
galP
Sodium:galactoside symporter.
 
  
 0.584
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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