STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpAUTP--glucose-1-phosphate uridylyltransferase; UTP + D-Glucose 1-phosphate <=> Pyrophosphate + UDP-glucose. (457 aa)    
Predicted Functional Partners:
pgm1
Phosphoglucomutase; D-Glucose 1-phosphate <=> alpha-D-Glucose 6-phosphate.
   
 0.950
glgP
Alpha-glucan phosphorylase; (1,4-alpha-D-glucosyl)(n) + phosphate = (1,4-alpha-D-glucosyl)(n-1) + alpha-D-glucose 1-phosphate.
   
 
 0.932
udgA
UDP-glucose + H2O + 2 NAD+ <=> UDP-glucuronate + 2 NADH + H+.
     
 0.910
sqdB
UDP-sulfoquinovose synthase; UDP-glucose + HSO3- <=> UDP-6-sulfoquinovose + H2O.
     
 0.909
galE1
UDP-glucose = UDP-galactose.
    
 0.909
galE2
# UDP-glucose <=> UDP-D-galactose dTDP-glucose <=> dTDP-galactose.
    
 0.909
galE3
UDP-glucose 4-epimerase.
    
 0.909
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
 0.906
glgA
Glycosyltransferase (glycogen synthase); ADP-glucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase.
   
 
 0.904
malQ1
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme); Transfers a segment of a (1->4)-alpha-D-glucan to a new position in an acceptor, which may be glucose or a (1->4)-alpha-D-glucan.
     
 0.901
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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