Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ahpC | bcp | PFREUD_05410 | PFREUD_07790 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Bcp Putative peroxiredoxin (Thioredoxin reductase). | 0.569 |
| ahpC | dps | PFREUD_05410 | PFREUD_02870 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Starvation-inducible DNA-binding protein; Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation; Belongs to the Dps family. | 0.766 |
| ahpC | gltB | PFREUD_05410 | PFREUD_11860 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Glutamate synthase large subunit (Ferredoxin); 2 L-Glutamate + 2 Oxidized ferredoxin <=> L-Glutamine + 2-Oxoglutarate + 2 Reduced ferredoxin. | 0.672 |
| ahpC | recA | PFREUD_05410 | PFREUD_13130 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | RecA (Recombinase A); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.551 |
| ahpC | sodA | PFREUD_05410 | PFREUD_06110 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Iron/Manganese superoxide dismutase (Superoxide dismutase [Mn/Fe]) (SODM); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.864 |
| ahpC | trxA2 | PFREUD_05410 | PFREUD_00640 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thioredoxin. | 0.984 |
| ahpC | trxA4 | PFREUD_05410 | PFREUD_18140 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thiredoxine; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. Protein dithiol + NAD+ <=> Protein disulfide + NADH + H+; Belongs to the thioredoxin family. | 0.662 |
| ahpC | trxB | PFREUD_05410 | PFREUD_24100 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thioredoxin reductase. | 0.922 |
| bcp | ahpC | PFREUD_07790 | PFREUD_05410 | Bcp Putative peroxiredoxin (Thioredoxin reductase). | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.569 |
| bcp | trxA2 | PFREUD_07790 | PFREUD_00640 | Bcp Putative peroxiredoxin (Thioredoxin reductase). | Thioredoxin. | 0.521 |
| bcp | trxA4 | PFREUD_07790 | PFREUD_18140 | Bcp Putative peroxiredoxin (Thioredoxin reductase). | Thiredoxine; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. Protein dithiol + NAD+ <=> Protein disulfide + NADH + H+; Belongs to the thioredoxin family. | 0.618 |
| bcp | trxB | PFREUD_07790 | PFREUD_24100 | Bcp Putative peroxiredoxin (Thioredoxin reductase). | Thioredoxin reductase. | 0.554 |
| cadA | trxA4 | PFREUD_22190 | PFREUD_18140 | ATPase, E1-E2 type:Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase. | Thiredoxine; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. Protein dithiol + NAD+ <=> Protein disulfide + NADH + H+; Belongs to the thioredoxin family. | 0.438 |
| dps | ahpC | PFREUD_02870 | PFREUD_05410 | Starvation-inducible DNA-binding protein; Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation; Belongs to the Dps family. | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.766 |
| dps | sodA | PFREUD_02870 | PFREUD_06110 | Starvation-inducible DNA-binding protein; Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation; Belongs to the Dps family. | Iron/Manganese superoxide dismutase (Superoxide dismutase [Mn/Fe]) (SODM); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.478 |
| dps | trxA2 | PFREUD_02870 | PFREUD_00640 | Starvation-inducible DNA-binding protein; Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation; Belongs to the Dps family. | Thioredoxin. | 0.442 |
| dps | trxA4 | PFREUD_02870 | PFREUD_18140 | Starvation-inducible DNA-binding protein; Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation; Belongs to the Dps family. | Thiredoxine; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. Protein dithiol + NAD+ <=> Protein disulfide + NADH + H+; Belongs to the thioredoxin family. | 0.448 |
| dtxR | trxA4 | PFREUD_18150 | PFREUD_18140 | Iron-dependent repressor. | Thiredoxine; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. Protein dithiol + NAD+ <=> Protein disulfide + NADH + H+; Belongs to the thioredoxin family. | 0.564 |
| gltB | ahpC | PFREUD_11860 | PFREUD_05410 | Glutamate synthase large subunit (Ferredoxin); 2 L-Glutamate + 2 Oxidized ferredoxin <=> L-Glutamine + 2-Oxoglutarate + 2 Reduced ferredoxin. | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.672 |
| gltB | recA | PFREUD_11860 | PFREUD_13130 | Glutamate synthase large subunit (Ferredoxin); 2 L-Glutamate + 2 Oxidized ferredoxin <=> L-Glutamine + 2-Oxoglutarate + 2 Reduced ferredoxin. | RecA (Recombinase A); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.746 |
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