STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57432.1Metallophosphoesterase. (323 aa)    
Predicted Functional Partners:
ponA
The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyses the polymerisation of murein glycan chains.
       0.850
whiB3
Transcription factor WhiB.
 
     0.690
CBL56466.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.664
CBL57435.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.626
CBL56770.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.618
CBL56791.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.613
CBL55510.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.592
whiA
ABC transporter precursor; Involved in cell division and chromosome segregation.
  
     0.587
CBL56399.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.583
CBL57436.1
Endoribonuclease L-PSP; Inhibits protein synthesis by cleavage of mRNA.
       0.566
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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