Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBL57455.16 Protein of unknown function, without similarity to other proteins. (590 aa)    
Predicted Functional Partners:
pf456
5.2 Protein of unknown function similar to proteins from other organisms.
 
 
 0.926
CBL56754.1
Forkhead-associated protein; Involved in signal transduction mechanisms.
 
 
 
 0.881
pknB
Serine/threonine protein kinase; ATP + Protein <=> ADP + Phosphoprotein.
 
 
0.814
CBL56504.1
PP2Cc, Serine/threonine phosphatases.
 
 
 0.810
CBL57450.1
Forkhead-associated protein; Involved in signal transduction mechanisms.
 
 
 
 0.799
CBL57449.1
Forkhead-associated protein.
 
 
 
 0.730
ftsW2
Cell division protein; Belongs to the SEDS family.
 
 
 0.661
CBL57067.1
6 Protein of unknown function, without similarity to other proteins.
 
 
0.658
pbpA
Penicillin-binding protein.
  
  
 0.578
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
   
 0.435
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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