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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
feoAFerrous iron transport protein A; This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese. (119 aa)    
Predicted Functional Partners:
feoB
Fe2+ transport system protein B. Molecular function: GTP binding, iron ion binding. Cellular component: integral to membrane.
 
  
 0.962
gcvH
Glycine cleavage H-protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
 0.702
nifU2
NifU-like protein.
 
   
 0.691
ahpF
Alkyl hydroperoxide reductase subunit F.
      
 0.680
pf774
Putative carboxylic ester hydrolase.
  
    0.555
CBL57567.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.545
CBL56265.1
Hypothetical membrane protein.
  
     0.487
CBL56920.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
   
 0.478
CBL57079.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.464
CBL56404.1
Metallophosphoesterase.
  
     0.448
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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