Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56162.1 | CBL57487.1 | PFREUD_06320 | PFREUD_19940 | 6 Protein of unknown function, without similarity to other proteins. | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.607 |
| CBL56162.1 | nnrD | PFREUD_06320 | PFREUD_06300 | 6 Protein of unknown function, without similarity to other proteins. | Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.868 |
| CBL56162.1 | rph | PFREUD_06320 | PFREUD_07590 | 6 Protein of unknown function, without similarity to other proteins. | Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase); Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.662 |
| CBL56501.1 | CBL57487.1 | PFREUD_09760 | PFREUD_19940 | DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.607 |
| CBL56501.1 | nnrD | PFREUD_09760 | PFREUD_06300 | DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.868 |
| CBL56501.1 | rph | PFREUD_09760 | PFREUD_07590 | DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase); Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.662 |
| CBL57487.1 | CBL56162.1 | PFREUD_19940 | PFREUD_06320 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 6 Protein of unknown function, without similarity to other proteins. | 0.607 |
| CBL57487.1 | CBL56501.1 | PFREUD_19940 | PFREUD_09760 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family. | 0.607 |
| CBL57487.1 | mshD | PFREUD_19940 | PFREUD_19920 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.830 |
| CBL57487.1 | nnrD | PFREUD_19940 | PFREUD_06300 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.990 |
| CBL57487.1 | ppk | PFREUD_19940 | PFREUD_19930 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.925 |
| CBL57487.1 | pstA | PFREUD_19940 | PFREUD_19970 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | ABC transporter, permease protein; The complex is composed of two ATP-binding proteins (pstB), two transmembrane proteins (pstC and pstA) and a solute-binding protein (pstS). | 0.552 |
| CBL57487.1 | pstB | PFREUD_19940 | PFREUD_19980 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.552 |
| CBL57487.1 | pstC | PFREUD_19940 | PFREUD_19960 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.561 |
| CBL57487.1 | pstS | PFREUD_19940 | PFREUD_19950 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Phosphate-binding transport protein of ABC transporter system; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.565 |
| CBL57487.1 | rph | PFREUD_19940 | PFREUD_07590 | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase); Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.551 |
| mshD | CBL57487.1 | PFREUD_19920 | PFREUD_19940 | GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | NUDIX hydrolase NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.830 |
| mshD | ppk | PFREUD_19920 | PFREUD_19930 | GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.979 |
| mshD | pstA | PFREUD_19920 | PFREUD_19970 | GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | ABC transporter, permease protein; The complex is composed of two ATP-binding proteins (pstB), two transmembrane proteins (pstC and pstA) and a solute-binding protein (pstS). | 0.552 |
| mshD | pstB | PFREUD_19920 | PFREUD_19980 | GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.847 |
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