Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55739.1 | CBL56756.1 | PFREUD_02240 | PFREUD_12360 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.774 |
| CBL55739.1 | CBL56757.1 | PFREUD_02240 | PFREUD_12370 | 5.2 Protein of unknown function similar to proteins from other organisms. | This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown. | 0.860 |
| CBL55739.1 | disA | PFREUD_02240 | PFREUD_20160 | 5.2 Protein of unknown function similar to proteins from other organisms. | DNA integrity scanning protein disA; Participates in a DNA-damage check-point that is active prior to asymmetric division when DNA is damaged; Belongs to the DisA family. | 0.552 |
| CBL56506.1 | disA | PFREUD_09810 | PFREUD_20160 | ATP-dependent DNA helicase; REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA; Belongs to the helicase family. UvrD subfamily. | DNA integrity scanning protein disA; Participates in a DNA-damage check-point that is active prior to asymmetric division when DNA is damaged; Belongs to the DisA family. | 0.566 |
| CBL56506.1 | sms | PFREUD_09810 | PFREUD_20150 | ATP-dependent DNA helicase; REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA; Belongs to the helicase family. UvrD subfamily. | DNA repair protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.713 |
| CBL56756.1 | CBL55739.1 | PFREUD_12360 | PFREUD_02240 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.774 |
| CBL56756.1 | CBL56757.1 | PFREUD_12360 | PFREUD_12370 | 5.2 Protein of unknown function similar to proteins from other organisms. | This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown. | 0.977 |
| CBL56756.1 | CBL56758.1 | PFREUD_12360 | PFREUD_12380 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.951 |
| CBL56756.1 | disA | PFREUD_12360 | PFREUD_20160 | 5.2 Protein of unknown function similar to proteins from other organisms. | DNA integrity scanning protein disA; Participates in a DNA-damage check-point that is active prior to asymmetric division when DNA is damaged; Belongs to the DisA family. | 0.531 |
| CBL56756.1 | merR1 | PFREUD_12360 | PFREUD_12330 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcriptional regulator, MerR; MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. | 0.539 |
| CBL56757.1 | CBL55739.1 | PFREUD_12370 | PFREUD_02240 | This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.860 |
| CBL56757.1 | CBL56756.1 | PFREUD_12370 | PFREUD_12360 | This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.977 |
| CBL56757.1 | CBL56758.1 | PFREUD_12370 | PFREUD_12380 | This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.976 |
| CBL56757.1 | disA | PFREUD_12370 | PFREUD_20160 | This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown. | DNA integrity scanning protein disA; Participates in a DNA-damage check-point that is active prior to asymmetric division when DNA is damaged; Belongs to the DisA family. | 0.569 |
| CBL56757.1 | merR1 | PFREUD_12370 | PFREUD_12330 | This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown. | Transcriptional regulator, MerR; MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. | 0.465 |
| CBL56758.1 | CBL56756.1 | PFREUD_12380 | PFREUD_12360 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.951 |
| CBL56758.1 | CBL56757.1 | PFREUD_12380 | PFREUD_12370 | 5.2 Protein of unknown function similar to proteins from other organisms. | This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown. | 0.976 |
| CBL56758.1 | disA | PFREUD_12380 | PFREUD_20160 | 5.2 Protein of unknown function similar to proteins from other organisms. | DNA integrity scanning protein disA; Participates in a DNA-damage check-point that is active prior to asymmetric division when DNA is damaged; Belongs to the DisA family. | 0.569 |
| CBL56758.1 | merR1 | PFREUD_12380 | PFREUD_12330 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcriptional regulator, MerR; MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. | 0.445 |
| CBL57507.1 | disA | PFREUD_20140 | PFREUD_20160 | 5.2 Protein of unknown function similar to proteins from other organisms. | DNA integrity scanning protein disA; Participates in a DNA-damage check-point that is active prior to asymmetric division when DNA is damaged; Belongs to the DisA family. | 0.538 |
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