Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56339.1 | dmsB | PFREUD_08120 | PFREUD_20600 | 5.2 Protein of unknown function similar to proteins from other organisms. | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | 0.732 |
| CBL56339.1 | nifJ1 | PFREUD_08120 | PFREUD_01840 | 5.2 Protein of unknown function similar to proteins from other organisms. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.660 |
| CBL56339.1 | nifJ2 | PFREUD_08120 | PFREUD_07070 | 5.2 Protein of unknown function similar to proteins from other organisms. | Pyruvate:ferredoxin (Flavodoxin) oxidoreductase. | 0.676 |
| CBL56715.1 | dmsB | PFREUD_11930 | PFREUD_20600 | 5.2 Protein of unknown function similar to proteins from other organisms. | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | 0.919 |
| CBL56715.1 | nifJ1 | PFREUD_11930 | PFREUD_01840 | 5.2 Protein of unknown function similar to proteins from other organisms. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.828 |
| CBL56715.1 | nifJ2 | PFREUD_11930 | PFREUD_07070 | 5.2 Protein of unknown function similar to proteins from other organisms. | Pyruvate:ferredoxin (Flavodoxin) oxidoreductase. | 0.718 |
| CBL56715.1 | torD | PFREUD_11930 | PFREUD_20630 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cytoplasmic chaperone TorD. | 0.464 |
| CBL56715.1 | tuf | PFREUD_11930 | PFREUD_05650 | 5.2 Protein of unknown function similar to proteins from other organisms. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.763 |
| dmsA | dmsB | PFREUD_20610 | PFREUD_20600 | Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | 0.999 |
| dmsA | dmsC | PFREUD_20610 | PFREUD_20590 | Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Anaerobic dimethyl sulfoxide reductase chain C. | 0.996 |
| dmsA | nifJ1 | PFREUD_20610 | PFREUD_01840 | Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.859 |
| dmsA | nifJ2 | PFREUD_20610 | PFREUD_07070 | Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Pyruvate:ferredoxin (Flavodoxin) oxidoreductase. | 0.797 |
| dmsA | torD | PFREUD_20610 | PFREUD_20630 | Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytoplasmic chaperone TorD. | 0.940 |
| dmsA | tuf | PFREUD_20610 | PFREUD_05650 | Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.901 |
| dmsB | CBL56339.1 | PFREUD_20600 | PFREUD_08120 | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.732 |
| dmsB | CBL56715.1 | PFREUD_20600 | PFREUD_11930 | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.919 |
| dmsB | dmsA | PFREUD_20600 | PFREUD_20610 | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.999 |
| dmsB | dmsC | PFREUD_20600 | PFREUD_20590 | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | Anaerobic dimethyl sulfoxide reductase chain C. | 0.997 |
| dmsB | mrr | PFREUD_20600 | PFREUD_03200 | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | Restriction system protein; Involved in the acceptance of foreign DNA which is modified. Restricts both adenine- and cytosine-methylated DNA. | 0.732 |
| dmsB | narJ | PFREUD_20600 | PFREUD_21730 | Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC). | Nitrate reductase beta chain (fragment); # Nitrite + Acceptor <=> Nitrate + Reduced acceptor # Ferricytochrome c + Nitrite <=> Nitrate + Ferrocytochrome c Ubiquinol + Nitrate <=> Ubiquinone + Nitrite. | 0.651 |
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