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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57554.16 Protein of unknown function, without similarity to other proteins. (403 aa)    
Predicted Functional Partners:
nifJ2
Pyruvate:ferredoxin (Flavodoxin) oxidoreductase.
  
  
 0.873
nifJ1
Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin.
  
  
 0.747
dmsA
Anaerobic dimethyl sulfoxide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.703
dmsB
Anaerobic dimethyl sulfoxide reductase, chain B; Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. Heterotrimeric enzyme composed of a catalytic heterodimer (DmsAB) and a membrane anchor protein (DmsC).
  
  
 0.636
dmsC
Anaerobic dimethyl sulfoxide reductase chain C.
       0.626
fixA
Electron transfer flavoprotein (FixA protein); Required for anaerobic carnitine reduction. May bring reductant to caiA.
   
 
 0.594
sdhA
# Succinate + FAD <=> FADH2 + Fumarate, A flavoprotein (FAD) containing iron-sulfur centres. A component of EC 1.3.5.1 succinate dehydrogenase (ubiquinone).
  
 
 0.563
sdhA3
Succinate dehydrogenase flavoprotein subunit; Succinate + FAD <=> FADH2 + Fumarate.
  
 
 0.563
torD
Cytoplasmic chaperone TorD.
  
    0.518
CBL56066.1
Pyruvate flavodoxin/ferredoxin oxidoreductase.
  
  
 0.482
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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