STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57585.1Regulator of chromosome condensation. (699 aa)    
Predicted Functional Partners:
nuoM
NADH dehydrogenase I chain M; Ubiquinol + NAD+ <=> Ubiquinone + NADH + H+.
    
 
 0.787
CBL56314.1
Protein-tyrosine phosphatase; Protein tyrosine phosphate + H2O <=> Protein tyrosine + Orthophosphate.
   
 
 0.782
CBL57450.1
Forkhead-associated protein; Involved in signal transduction mechanisms.
  
 
  0.568
CBL56754.1
Forkhead-associated protein; Involved in signal transduction mechanisms.
  
 
  0.558
CBL57449.1
Forkhead-associated protein.
  
 
  0.554
CBL55855.1
6 Protein of unknown function, without similarity to other proteins.
    
  0.479
vpr
Subtilases are a family of serine proteases.
   
 
 0.473
CBL56637.1
5.2 Protein of unknown function similar to proteins from other organisms.
   
 
 0.473
sirR
Iron dependent repressor.
       0.471
moe
UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family.
   
 0.447
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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