Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55542.1 | CBL55646.1 | PFREUD_00420 | PFREUD_01280 | Nitroreductase; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. | ABC transporter, permease protein. | 0.543 |
| CBL55542.1 | CBL57659.1 | PFREUD_00420 | PFREUD_21570 | Nitroreductase; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. | ABC transporter (Permease). | 0.543 |
| CBL55542.1 | bluB/cobT2 | PFREUD_00420 | PFREUD_06370 | Nitroreductase; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. | Phosphoribosyltransferase/nitroreductase (fusion gene) (Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase). | 0.753 |
| CBL55645.1 | CBL55646.1 | PFREUD_01270 | PFREUD_01280 | ABC transporter, ATP-binding protein. | ABC transporter, permease protein. | 0.996 |
| CBL55645.1 | CBL57659.1 | PFREUD_01270 | PFREUD_21570 | ABC transporter, ATP-binding protein. | ABC transporter (Permease). | 0.517 |
| CBL55646.1 | CBL55542.1 | PFREUD_01280 | PFREUD_00420 | ABC transporter, permease protein. | Nitroreductase; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. | 0.543 |
| CBL55646.1 | CBL55645.1 | PFREUD_01280 | PFREUD_01270 | ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.996 |
| CBL55646.1 | CBL56142.1 | PFREUD_01280 | PFREUD_06120 | ABC transporter, permease protein. | ABC transporter ATP-binding protein. | 0.924 |
| CBL55646.1 | CBL56252.1 | PFREUD_01280 | PFREUD_07210 | ABC transporter, permease protein. | ABC transporter, ATP-binding component. | 0.935 |
| CBL55646.1 | CBL57000.1 | PFREUD_01280 | PFREUD_15010 | ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.449 |
| CBL55646.1 | CBL57659.1 | PFREUD_01280 | PFREUD_21570 | ABC transporter, permease protein. | ABC transporter (Permease). | 0.440 |
| CBL55646.1 | bluB/cobT2 | PFREUD_01280 | PFREUD_06370 | ABC transporter, permease protein. | Phosphoribosyltransferase/nitroreductase (fusion gene) (Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase). | 0.573 |
| CBL55646.1 | drrA | PFREUD_01280 | PFREUD_21560 | ABC transporter, permease protein. | DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. | 0.932 |
| CBL55646.1 | nodI | PFREUD_01280 | PFREUD_04880 | ABC transporter, permease protein. | Nod factor export ATP-binding protein I (Nodulation ATP-binding protein I). | 0.521 |
| CBL56142.1 | CBL55646.1 | PFREUD_06120 | PFREUD_01280 | ABC transporter ATP-binding protein. | ABC transporter, permease protein. | 0.924 |
| CBL56142.1 | CBL57659.1 | PFREUD_06120 | PFREUD_21570 | ABC transporter ATP-binding protein. | ABC transporter (Permease). | 0.619 |
| CBL56252.1 | CBL55646.1 | PFREUD_07210 | PFREUD_01280 | ABC transporter, ATP-binding component. | ABC transporter, permease protein. | 0.935 |
| CBL56252.1 | CBL57659.1 | PFREUD_07210 | PFREUD_21570 | ABC transporter, ATP-binding component. | ABC transporter (Permease). | 0.661 |
| CBL57000.1 | CBL55646.1 | PFREUD_15010 | PFREUD_01280 | ABC transporter, ATP-binding protein. | ABC transporter, permease protein. | 0.449 |
| CBL57000.1 | CBL57659.1 | PFREUD_15010 | PFREUD_21570 | ABC transporter, ATP-binding protein. | ABC transporter (Permease). | 0.517 |
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