Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56121.1 | cysH | PFREUD_05910 | PFREUD_21630 | NAD(P)H-dependent FMN reductase. | Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.920 |
| CBL56121.1 | nirA2/sir2 | PFREUD_05910 | PFREUD_21620 | NAD(P)H-dependent FMN reductase. | Sulfite reductase [ferredoxin]; Hydrogen sulfide + 6 oxidized ferredoxin + 3 H2O = sulfite + 6 reduced ferredoxin + 6 H+.Binds 1 siroheme per subunit Binds 1 4Fe-4S cluster per subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.911 |
| CBL56121.1 | sseB | PFREUD_05910 | PFREUD_23220 | NAD(P)H-dependent FMN reductase. | Thiosulfate + Cyanide <=> Sulfite + Thiocyanate. | 0.900 |
| CBL56766.1 | cobA | PFREUD_12500 | PFREUD_04550 | 5.2 Protein of unknown function similar to proteins from other organisms. | * 2 S-Adenosyl-L-methionine + Uroporphyrinogen III <=> 2 S-Adenosyl-L-homocysteine + Precorrin 2. | 0.488 |
| CBL56766.1 | cysG/cbiX | PFREUD_12500 | PFREUD_07710 | 5.2 Protein of unknown function similar to proteins from other organisms. | CysG/CbiX; Cobalt fixation on precorrin 2. | 0.725 |
| CBL56766.1 | cysH | PFREUD_12500 | PFREUD_21630 | 5.2 Protein of unknown function similar to proteins from other organisms. | Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.810 |
| CBL56766.1 | mmcV/cysD | PFREUD_12500 | PFREUD_21640 | 5.2 Protein of unknown function similar to proteins from other organisms. | ATP + sulfate = diphosphate + adenylyl sulfate. | 0.512 |
| CBL56766.1 | nirA2/sir2 | PFREUD_12500 | PFREUD_21620 | 5.2 Protein of unknown function similar to proteins from other organisms. | Sulfite reductase [ferredoxin]; Hydrogen sulfide + 6 oxidized ferredoxin + 3 H2O = sulfite + 6 reduced ferredoxin + 6 H+.Binds 1 siroheme per subunit Binds 1 4Fe-4S cluster per subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.810 |
| CBL57663.1 | cysH | PFREUD_21610 | PFREUD_21630 | Sulfate-binding protein precursor. | Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.748 |
| CBL57663.1 | cysN | PFREUD_21610 | PFREUD_21650 | Sulfate-binding protein precursor. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.984 |
| CBL57663.1 | cysW | PFREUD_21610 | PFREUD_21590 | Sulfate-binding protein precursor. | Sulfate transport system permease protein CysW. | 0.999 |
| CBL57663.1 | mmcV/cysD | PFREUD_21610 | PFREUD_21640 | Sulfate-binding protein precursor. | ATP + sulfate = diphosphate + adenylyl sulfate. | 0.975 |
| CBL57663.1 | nirA2/sir2 | PFREUD_21610 | PFREUD_21620 | Sulfate-binding protein precursor. | Sulfite reductase [ferredoxin]; Hydrogen sulfide + 6 oxidized ferredoxin + 3 H2O = sulfite + 6 reduced ferredoxin + 6 H+.Binds 1 siroheme per subunit Binds 1 4Fe-4S cluster per subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.603 |
| cobA | CBL56766.1 | PFREUD_04550 | PFREUD_12500 | * 2 S-Adenosyl-L-methionine + Uroporphyrinogen III <=> 2 S-Adenosyl-L-homocysteine + Precorrin 2. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.488 |
| cobA | cysG/cbiX | PFREUD_04550 | PFREUD_07710 | * 2 S-Adenosyl-L-methionine + Uroporphyrinogen III <=> 2 S-Adenosyl-L-homocysteine + Precorrin 2. | CysG/CbiX; Cobalt fixation on precorrin 2. | 0.996 |
| cobA | cysH | PFREUD_04550 | PFREUD_21630 | * 2 S-Adenosyl-L-methionine + Uroporphyrinogen III <=> 2 S-Adenosyl-L-homocysteine + Precorrin 2. | Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.761 |
| cobA | mmcV/cysD | PFREUD_04550 | PFREUD_21640 | * 2 S-Adenosyl-L-methionine + Uroporphyrinogen III <=> 2 S-Adenosyl-L-homocysteine + Precorrin 2. | ATP + sulfate = diphosphate + adenylyl sulfate. | 0.611 |
| cobA | nirA2/sir2 | PFREUD_04550 | PFREUD_21620 | * 2 S-Adenosyl-L-methionine + Uroporphyrinogen III <=> 2 S-Adenosyl-L-homocysteine + Precorrin 2. | Sulfite reductase [ferredoxin]; Hydrogen sulfide + 6 oxidized ferredoxin + 3 H2O = sulfite + 6 reduced ferredoxin + 6 H+.Binds 1 siroheme per subunit Binds 1 4Fe-4S cluster per subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.882 |
| cysG/cbiX | CBL56766.1 | PFREUD_07710 | PFREUD_12500 | CysG/CbiX; Cobalt fixation on precorrin 2. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.725 |
| cysG/cbiX | cobA | PFREUD_07710 | PFREUD_04550 | CysG/CbiX; Cobalt fixation on precorrin 2. | * 2 S-Adenosyl-L-methionine + Uroporphyrinogen III <=> 2 S-Adenosyl-L-homocysteine + Precorrin 2. | 0.996 |
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