STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57700.1Two component transcriptional regulator, LuxR family. (220 aa)    
Predicted Functional Partners:
CBL57699.1
Two component sensor kinase.
 
 0.951
CBL57299.1
Two-component system sensor kinase. Membrane protein.
 
 
 0.862
CBL55679.1
Two component sensor kinase.
 
 0.860
CBL57020.1
Signal transduction histidine kinase/two-component system sensor kinase.
 
 0.851
CBL57285.1
Sensor kinase-Membrane protein.
 
 
 0.844
CBL56203.1
Two-component system sensor kinase.
 
 
 0.642
CBL55532.1
Two-component system sensor kinase.
 
 
 0.617
int-25
Integrase, catalytic region.
       0.422
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.