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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57763.16 Protein of unknown function, without similarity to other proteins. (94 aa)    
Predicted Functional Partners:
PFREUD_11130
ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like.
  
     0.751
CBL56632.1
Single-strand binding protein/Primosomal replication protein.
  
     0.615
CBL57764.1
5.2 Protein of unknown function similar to proteins from other organisms.
       0.565
CBL56631.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.548
CBL55707.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.502
CBL57761.1
6 Protein of unknown function, without similarity to other proteins.
       0.415
CBL57762.1
6 Protein of unknown function, without similarity to other proteins.
       0.415
CBL56637.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.403
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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