STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57785.15.2 Protein of unknown function similar to proteins from other organisms. (259 aa)    
Predicted Functional Partners:
CBL57786.1
Transcriptional regulator.
       0.819
gin
Resolvase; This protein catalyzes the inversion of a 3000-bp segment of phage DNA. The inversion results in a modification of the 3prime-end of the tail fiber gene and alters the host specificity.
       0.773
CBL57024.1
Acetyltransferase.
  
 
   0.637
CBL56386.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.578
CBL56322.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
    0.499
CBL57783.1
6 Protein of unknown function, without similarity to other proteins.
       0.466
tnpA-34
Transposase (fragment).
       0.466
CBL56404.1
Metallophosphoesterase.
  
     0.441
CBL57717.1
Transcriptional Regulator, TetR family.
  
     0.431
int-27
Integrase, catalytic region; Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome.
       0.423
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.