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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57808.1Hydroxypyruvate <=> 2-Hydroxy-3-oxopropanoate; Belongs to the hyi family. (265 aa)    
Predicted Functional Partners:
gya
Glycolate + NAD+ = glyoxylate + NADH. _ Glycolate + NAD+ <=> Glyoxylate + NADH + H+; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.905
iolT1
iolT1 (Major myo-inositol transporter iolT1); Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.479
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Carbohydrate degradation, myo-inositol degradation to acetyl-CoA; Belongs to the TPP enzyme family.
 
     0.441
iolB
iolB (Myo-inositol catabolism IolB protein); Carbohydrate degradation, myo-inositol degradation to acetyl-CoA.
 
     0.418
iolG1
iolG1 (Myo-inositol catabolism IolG1 protein) (myo-inositol 2-dehydrogenase); Carbohydrate degradation, myo-inositol degradation to acetyl-CoA.
 
    0.403
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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