Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56195.1 | CBL56198.1 | PFREUD_06640 | PFREUD_06670 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | 0.997 |
| CBL56195.1 | biaA | PFREUD_06640 | PFREUD_06630 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Locus abc transport. | 0.999 |
| CBL56195.1 | lacI3 | PFREUD_06640 | PFREUD_23140 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.459 |
| CBL56195.1 | ytfT | PFREUD_06640 | PFREUD_06660 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Ribose transport system permease protein RbsC, Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.994 |
| CBL56198.1 | CBL56195.1 | PFREUD_06670 | PFREUD_06640 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | 0.997 |
| CBL56198.1 | biaA | PFREUD_06670 | PFREUD_06630 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | Locus abc transport. | 0.997 |
| CBL56198.1 | lacI3 | PFREUD_06670 | PFREUD_23140 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.457 |
| CBL56198.1 | ytfT | PFREUD_06670 | PFREUD_06660 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | Ribose transport system permease protein RbsC, Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.984 |
| CBL57441.1 | lacI3 | PFREUD_19480 | PFREUD_23140 | Phosphocarrier, HPr family; HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation across the cell membrane. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.453 |
| CBL57441.1 | pptE | PFREUD_19480 | PFREUD_08000 | Phosphocarrier, HPr family; HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation across the cell membrane. | Phosphoenolpyruvate-protein phosphoryltransferase PptE; Belongs to the PEP-utilizing enzyme family. | 0.988 |
| biaA | CBL56195.1 | PFREUD_06630 | PFREUD_06640 | Locus abc transport. | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | 0.999 |
| biaA | CBL56198.1 | PFREUD_06630 | PFREUD_06670 | Locus abc transport. | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | 0.997 |
| biaA | lacI3 | PFREUD_06630 | PFREUD_23140 | Locus abc transport. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.433 |
| biaA | ytfT | PFREUD_06630 | PFREUD_06660 | Locus abc transport. | Ribose transport system permease protein RbsC, Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.994 |
| deoR1 | lacI3 | PFREUD_00780 | PFREUD_23140 | Transcriptional regulator of sugar metabolism. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.426 |
| deoR1 | pptE | PFREUD_00780 | PFREUD_08000 | Transcriptional regulator of sugar metabolism. | Phosphoenolpyruvate-protein phosphoryltransferase PptE; Belongs to the PEP-utilizing enzyme family. | 0.468 |
| deoR3 | lacI3 | PFREUD_22450 | PFREUD_23140 | Putative regulatory protein, DeoR family; Transcription regulation of arabinose/xylulose/ribulose operon ?. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.451 |
| deoR3 | pptE | PFREUD_22450 | PFREUD_08000 | Putative regulatory protein, DeoR family; Transcription regulation of arabinose/xylulose/ribulose operon ?. | Phosphoenolpyruvate-protein phosphoryltransferase PptE; Belongs to the PEP-utilizing enzyme family. | 0.468 |
| gltB | lacI3 | PFREUD_11860 | PFREUD_23140 | Glutamate synthase large subunit (Ferredoxin); 2 L-Glutamate + 2 Oxidized ferredoxin <=> L-Glutamine + 2-Oxoglutarate + 2 Reduced ferredoxin. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.804 |
| iolH | lacI3 | PFREUD_23130 | PFREUD_23140 | iolG2 (Myo-inositol catabolism IolG2 protein) (Inositol 2-dehydrogenase); Inositol + NAD+ <=> 2,4,6/3,5-Pentahydroxycyclohexanone + NADH + H+. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.473 |
page 1 of 2