Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBL57855.1Binding-protein-dependent transport systems inner membrane component. (326 aa)    
Predicted Functional Partners:
CBL57853.1
6 Protein of unknown function, without similarity to other proteins.
 
 0.999
CBL57856.1
Extracellular solute-binding protein precursor.
 
 0.996
CBL57350.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.991
CBL57926.1
ABC transporter, substrate-binding protein.
 
 
 0.905
CBL56806.1
ABC transporter.
 
 
 0.857
lacI-2
LacI-type transcriptional regulator; Repressor of the lactose operon. Binds lactose as an inducer.
  
 
 0.824
PFREUD_23380
Transmembrane transport protein.
       0.428
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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