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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aglAAlpha-1,4-glucosidase. (580 aa)    
Predicted Functional Partners:
PPA1112
Uncharacterized protein probably involved in trehalose biosynthesis.
 0.992
malQ1
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme); Transfers a segment of a (1->4)-alpha-D-glucan to a new position in an acceptor, which may be glucose or a (1->4)-alpha-D-glucan.
  
 
 0.975
malQ2
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme); Amylose <=> 1,4-alpha-D-Glucan.
  
 
 0.975
treS
Trehalose synthase; Catalyzes the conversion of maltose into alpha,alpha-trehalose by transglucosylation. Annotated from blastp from sequence of (Cardoso et al, 2007 PubMed 17185556).
 
  
0.941
CBL55785.1
Beta-glucosidase; D-Glucoside + H2O <=> ROH + alpha-D-Glucose; Belongs to the glycosyl hydrolase 3 family.
  
 
 0.939
CBL57876.1
Alpha-amylase; Starch + H2O <=> Dextrin + Starch.
 
  
 
0.928
frk
Fructokinase; ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate.
 
 
 0.919
glgE
Glycosyl hydrolase, family 13 (putative alpha-amylase, catalytic domain); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
   
 0.829
glgX
Glycogen debranching enzyme activity, hydrolase activity, hydrolyzing O-glycosyl compounds; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.768
glgX/treX
Glycogen debranching enzyme GlgX Isoamylase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.767
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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