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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57913.1Oxidoreductase. (218 aa)    
Predicted Functional Partners:
CBL56774.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.702
CBL55977.1
Thiamine pyrophosphate enzyme; Belongs to the TPP enzyme family.
  
    0.686
CBL57319.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.609
tetR1
Transcriptional regulator, TetR family.
       0.596
CBL57657.1
Transcription regulator.
  
     0.550
pf1655
Carboxylic ester hydrolase; Recombinant protein active on 1- naphthyl actetate and 1- naphthyl propionate.
  
     0.480
CBL56201.1
NADPH:quinone reductase related Zn-dependent oxidoreductase.
  
    0.477
CBL57914.1
5.2 Protein of unknown function similar to proteins from other organisms.
       0.450
CBL55691.1
Peptidase; Pfam domain.
  
    0.438
CBL55683.1
5.2 Protein of unknown function similar to proteins from other organisms.
   
    0.429
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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