Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ahpC | moe | PFREUD_05410 | PFREUD_16540 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. | 0.418 |
| ahpC | nifJ1 | PFREUD_05410 | PFREUD_01840 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.608 |
| ahpC | trxA1 | PFREUD_05410 | PFREUD_24110 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thioredoxin. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond; Belongs to the thioredoxin family. | 0.671 |
| ahpC | trxA2 | PFREUD_05410 | PFREUD_00640 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thioredoxin. | 0.984 |
| ahpC | trxA3 | PFREUD_05410 | PFREUD_10600 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thioredoxin. | 0.614 |
| ahpC | trxA4 | PFREUD_05410 | PFREUD_18140 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thiredoxine; Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. Protein dithiol + NAD+ <=> Protein disulfide + NADH + H+; Belongs to the thioredoxin family. | 0.662 |
| ahpC | trxA5 | PFREUD_05410 | PFREUD_17940 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thioredoxin; Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. | 0.671 |
| ahpC | trxA6 | PFREUD_05410 | PFREUD_19550 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. | 0.662 |
| ahpC | trxB | PFREUD_05410 | PFREUD_24100 | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Thioredoxin reductase. | 0.922 |
| moe | ahpC | PFREUD_16540 | PFREUD_05410 | UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.418 |
| moe | nifJ1 | PFREUD_16540 | PFREUD_01840 | UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.524 |
| moe | sufS | PFREUD_16540 | PFREUD_14940 | UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. | Cysteine desulphurases, SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.666 |
| moe | trxA2 | PFREUD_16540 | PFREUD_00640 | UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. | Thioredoxin. | 0.435 |
| moe | trxB | PFREUD_16540 | PFREUD_24100 | UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. | Thioredoxin reductase. | 0.700 |
| nifJ1 | ahpC | PFREUD_01840 | PFREUD_05410 | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | Alkyl hydroperoxide reductase C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.608 |
| nifJ1 | moe | PFREUD_01840 | PFREUD_16540 | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. | 0.524 |
| nifJ1 | sufS | PFREUD_01840 | PFREUD_14940 | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | Cysteine desulphurases, SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.647 |
| nifJ1 | trxB | PFREUD_01840 | PFREUD_24100 | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | Thioredoxin reductase. | 0.783 |
| sufS | moe | PFREUD_14940 | PFREUD_16540 | Cysteine desulphurases, SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | UBA/THIF-type NAD/FAD binding protein; Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. | 0.666 |
| sufS | nifJ1 | PFREUD_14940 | PFREUD_01840 | Cysteine desulphurases, SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.647 |
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