Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55622.1 | CBL56585.1 | PFREUD_01100 | PFREUD_10620 | 5.2 Protein of unknown function similar to proteins from other organisms. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.467 |
| CBL55622.1 | osmC | PFREUD_01100 | PFREUD_24120 | 5.2 Protein of unknown function similar to proteins from other organisms. | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 0.461 |
| CBL56240.1 | osmC | PFREUD_07090 | PFREUD_24120 | 6 Protein of unknown function, without similarity to other proteins. | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 0.445 |
| CBL56277.1 | osmC | PFREUD_07460 | PFREUD_24120 | Hypothetical protein; Pfam06271, RDD family. This family of proteins contain 3 highly conserved amino acids: one arginine and two aspartates. The arginine occurs at the N terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown but may be involved in transport of an as yet unknown set of ligands. | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 0.440 |
| CBL56455.1 | osmC | PFREUD_09290 | PFREUD_24120 | ABC-type transport system, permease component; Signal peptide. | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 0.462 |
| CBL56585.1 | CBL55622.1 | PFREUD_10620 | PFREUD_01100 | NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.467 |
| CBL56585.1 | osmC | PFREUD_10620 | PFREUD_24120 | NUDIX hydrolase; Belongs to the Nudix hydrolase family. | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 0.495 |
| CBL57022.1 | CBL57023.1 | PFREUD_15230 | PFREUD_15240 | ABC transporter, ATP-binding protein. | ABC-type Na+ efflux pump permease component. | 0.971 |
| CBL57022.1 | osmC | PFREUD_15230 | PFREUD_24120 | ABC transporter, ATP-binding protein. | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 0.445 |
| CBL57023.1 | CBL57022.1 | PFREUD_15240 | PFREUD_15230 | ABC-type Na+ efflux pump permease component. | ABC transporter, ATP-binding protein. | 0.971 |
| CBL57023.1 | osmC | PFREUD_15240 | PFREUD_24120 | ABC-type Na+ efflux pump permease component. | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 0.505 |
| CBL57930.1 | osmC | PFREUD_24130 | PFREUD_24120 | 6 Protein of unknown function, without similarity to other proteins. | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 0.773 |
| CBL57930.1 | trxA1 | PFREUD_24130 | PFREUD_24110 | 6 Protein of unknown function, without similarity to other proteins. | Thioredoxin. Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond; Belongs to the thioredoxin family. | 0.773 |
| CBL57930.1 | trxB | PFREUD_24130 | PFREUD_24100 | 6 Protein of unknown function, without similarity to other proteins. | Thioredoxin reductase. | 0.459 |
| osmC | CBL55622.1 | PFREUD_24120 | PFREUD_01100 | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.461 |
| osmC | CBL56240.1 | PFREUD_24120 | PFREUD_07090 | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | 6 Protein of unknown function, without similarity to other proteins. | 0.445 |
| osmC | CBL56277.1 | PFREUD_24120 | PFREUD_07460 | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | Hypothetical protein; Pfam06271, RDD family. This family of proteins contain 3 highly conserved amino acids: one arginine and two aspartates. The arginine occurs at the N terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown but may be involved in transport of an as yet unknown set of ligands. | 0.440 |
| osmC | CBL56455.1 | PFREUD_24120 | PFREUD_09290 | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | ABC-type transport system, permease component; Signal peptide. | 0.462 |
| osmC | CBL56585.1 | PFREUD_24120 | PFREUD_10620 | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.495 |
| osmC | CBL57022.1 | PFREUD_24120 | PFREUD_15230 | OsmC protein; Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. | ABC transporter, ATP-binding protein. | 0.445 |
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