Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55601.1 | CBL55605.1 | PFREUD_00970 | PFREUD_01010 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 6 Protein of unknown function, without similarity to other proteins. | 0.553 |
| CBL55601.1 | aatA | PFREUD_00970 | PFREUD_00990 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.773 |
| CBL55601.1 | int-10 | PFREUD_00970 | PFREUD_24290 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Integrase, catalytic region. | 0.406 |
| CBL55601.1 | norB | PFREUD_00970 | PFREUD_00980 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O. | 0.954 |
| CBL55601.1 | tnpC | PFREUD_00970 | PFREUD_24280 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Transposase IS3/IS911. | 0.406 |
| CBL55605.1 | CBL55601.1 | PFREUD_01010 | PFREUD_00970 | 6 Protein of unknown function, without similarity to other proteins. | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 0.553 |
| CBL55605.1 | aatA | PFREUD_01010 | PFREUD_00990 | 6 Protein of unknown function, without similarity to other proteins. | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.553 |
| CBL55605.1 | int-10 | PFREUD_01010 | PFREUD_24290 | 6 Protein of unknown function, without similarity to other proteins. | Integrase, catalytic region. | 0.549 |
| CBL55605.1 | norB | PFREUD_01010 | PFREUD_00980 | 6 Protein of unknown function, without similarity to other proteins. | Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O. | 0.553 |
| CBL55605.1 | tnpC | PFREUD_01010 | PFREUD_24280 | 6 Protein of unknown function, without similarity to other proteins. | Transposase IS3/IS911. | 0.549 |
| aatA | CBL55601.1 | PFREUD_00990 | PFREUD_00970 | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 0.773 |
| aatA | CBL55605.1 | PFREUD_00990 | PFREUD_01010 | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 6 Protein of unknown function, without similarity to other proteins. | 0.553 |
| aatA | int-10 | PFREUD_00990 | PFREUD_24290 | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Integrase, catalytic region. | 0.406 |
| aatA | norB | PFREUD_00990 | PFREUD_00980 | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O. | 0.773 |
| aatA | tnpC | PFREUD_00990 | PFREUD_24280 | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Transposase IS3/IS911. | 0.406 |
| int-10 | CBL55601.1 | PFREUD_24290 | PFREUD_00970 | Integrase, catalytic region. | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 0.406 |
| int-10 | CBL55605.1 | PFREUD_24290 | PFREUD_01010 | Integrase, catalytic region. | 6 Protein of unknown function, without similarity to other proteins. | 0.549 |
| int-10 | aatA | PFREUD_24290 | PFREUD_00990 | Integrase, catalytic region. | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.406 |
| int-10 | norB | PFREUD_24290 | PFREUD_00980 | Integrase, catalytic region. | Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O. | 0.406 |
| int-10 | tnpC | PFREUD_24290 | PFREUD_24280 | Integrase, catalytic region. | Transposase IS3/IS911. | 0.786 |
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