STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WPG_10692-dehydro-3-deoxygluconate kinase. (122 aa)    
Predicted Functional Partners:
WPG_1068
2-dehydro-3-deoxygluconate kinase.
     0.994
WPG_1052
4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.825
WPG_1067
Alginate lyase.
  
    0.607
WPG_1065
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
  
  
 0.531
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
    0.524
WPG_1071
Alginate lyase precursor.
       0.495
Your Current Organism:
Winogradskyella sp. PG2
NCBI taxonomy Id: 754409
Other names: W. sp. PG-2, Winogradskyella sp. PG-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.