STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WPG_2139Hypothetical protein. (123 aa)    
Predicted Functional Partners:
WPG_2138
Mobile element protein.
 
     0.558
WPG_3432
Hypothetical protein.
  
     0.509
WPG_2141
Mobile element protein.
 
     0.496
WPG_2373
Hypothetical protein.
  
     0.482
WPG_2668
Hypothetical protein.
  
    0.462
WPG_1411
Hypothetical protein.
  
     0.452
WPG_0395
V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.
  
   
 0.411
WPG_1460
Hypothetical protein.
  
     0.408
Your Current Organism:
Winogradskyella sp. PG2
NCBI taxonomy Id: 754409
Other names: W. sp. PG-2, Winogradskyella sp. PG-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.