STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WPG_3208Response regulator. (515 aa)    
Predicted Functional Partners:
WPG_1645
Sensor histidine kinase.
 
 
 
 0.791
WPG_0618
Hypothetical protein.
  
     0.746
lpxC
N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
   
 0.687
WPG_3207
Deoxyguanosinetriphosphate triphosphohydrolase.
 
     0.671
WPG_2445
Hypothetical protein.
 
 
 
 0.661
WPG_1226
UDP-2,3-diacylglucosamine hydrolase.
  
     0.637
WPG_3209
ATPase YjeE.
       0.619
WPG_0619
Hypothetical protein.
 
  
 0.599
WPG_3310
Hypothetical protein-transmembrane prediction.
  
     0.532
WPG_0242
Hypothetical protein.
  
     0.529
Your Current Organism:
Winogradskyella sp. PG2
NCBI taxonomy Id: 754409
Other names: W. sp. PG-2, Winogradskyella sp. PG-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.