Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAL02792.1 | GAL02938.1 | JCM19237_5685 | JCM19237_5831 | DNA polymerase III epsilon subunit. | Phage protein. | 0.806 |
| GAL02792.1 | GAL07302.1 | JCM19237_5685 | JCM19237_3241 | DNA polymerase III epsilon subunit. | 3'-5' exonuclease domain similar to epsilon subunit of DNA polymerase III. | 0.721 |
| GAL02792.1 | GAL07882.1 | JCM19237_5685 | JCM19237_262 | DNA polymerase III epsilon subunit. | 3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.533 |
| GAL02792.1 | dnaQ | JCM19237_5685 | JCM19237_90 | DNA polymerase III epsilon subunit. | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.753 |
| GAL02938.1 | GAL02792.1 | JCM19237_5831 | JCM19237_5685 | Phage protein. | DNA polymerase III epsilon subunit. | 0.806 |
| GAL02938.1 | GAL03442.1 | JCM19237_5831 | JCM19237_6336 | Phage protein. | DNA polymerase III epsilon subunit. | 0.787 |
| GAL02938.1 | GAL07882.1 | JCM19237_5831 | JCM19237_262 | Phage protein. | 3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.625 |
| GAL02938.1 | dnaQ | JCM19237_5831 | JCM19237_90 | Phage protein. | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.742 |
| GAL03442.1 | GAL02938.1 | JCM19237_6336 | JCM19237_5831 | DNA polymerase III epsilon subunit. | Phage protein. | 0.787 |
| GAL03442.1 | GAL07302.1 | JCM19237_6336 | JCM19237_3241 | DNA polymerase III epsilon subunit. | 3'-5' exonuclease domain similar to epsilon subunit of DNA polymerase III. | 0.815 |
| GAL03442.1 | GAL07882.1 | JCM19237_6336 | JCM19237_262 | DNA polymerase III epsilon subunit. | 3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.533 |
| GAL03442.1 | dnaQ | JCM19237_6336 | JCM19237_90 | DNA polymerase III epsilon subunit. | DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.725 |
| GAL03503.1 | GAL07882.1 | JCM19237_6397 | JCM19237_262 | ATP-dependent RNA helicase HrpA. | 3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.588 |
| GAL05012.1 | GAL07882.1 | JCM19237_4378 | JCM19237_262 | Hypothetical protein. | 3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.527 |
| GAL07036.1 | GAL07882.1 | JCM19237_3041 | JCM19237_262 | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.535 |
| GAL07036.1 | rnt | JCM19237_3041 | JCM19237_1489 | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.521 |
| GAL07302.1 | GAL02792.1 | JCM19237_3241 | JCM19237_5685 | 3'-5' exonuclease domain similar to epsilon subunit of DNA polymerase III. | DNA polymerase III epsilon subunit. | 0.721 |
| GAL07302.1 | GAL03442.1 | JCM19237_3241 | JCM19237_6336 | 3'-5' exonuclease domain similar to epsilon subunit of DNA polymerase III. | DNA polymerase III epsilon subunit. | 0.815 |
| GAL07302.1 | GAL07882.1 | JCM19237_3241 | JCM19237_262 | 3'-5' exonuclease domain similar to epsilon subunit of DNA polymerase III. | 3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | 0.533 |
| GAL07882.1 | GAL02792.1 | JCM19237_262 | JCM19237_5685 | 3'-to-5' oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides. | DNA polymerase III epsilon subunit. | 0.533 |
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