STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL02113.1Alpha-galactosidase. (182 aa)    
Predicted Functional Partners:
GAL02114.1
Alpha-galactosidase.
     0.987
GAL03899.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.764
GAL03815.1
Alpha-galactosidase.
    
  0.666
GAL02131.1
Beta-galactosidase.
 
 
 0.650
GAL08106.1
Arylesterase precursor.
    
  0.638
GAL02132.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.638
GAL02130.1
Beta-galactosidase.
 
 
 0.637
GAL02103.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.610
GAL03918.1
Evolved beta-D-galactosidase alpha subunit.
 
 
 0.609
GAL02102.1
Galactokinase.
 
 
 0.605
Your Current Organism:
Photobacterium aphoticum
NCBI taxonomy Id: 754436
Other names: CECT 7614, DSM 25995, KCTC 23057, P. aphoticum, Photobacterium aphoticum Lucena et al. 2011, Photobacterium sp. CECT 7614, Vibrio sp. JCM 19237, strain M46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.