STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7A_1073PFAM: Domain related to MnhB subunit of Na+/H+ antiporter. (299 aa)    
Predicted Functional Partners:
Q7A_1072
PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
 
 
 0.992
Q7A_1069
PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.
 
 
 0.989
Q7A_1070
PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.
 
 
 0.989
Q7A_1071
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.
 
 
 0.988
Q7A_1074
PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.988
Q7A_1075
PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF).
 
 
 0.985
Q7A_1076
Hypothetical protein.
  
 
 0.871
Q7A_2668
Na(+) H(+) antiporter subunit C; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
  
 
 0.859
Q7A_2672
PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.832
Q7A_2669
Na(+) H(+) antiporter subunit D; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains.
 
 
 0.829
Your Current Organism:
Methylophaga nitratireducenticrescens
NCBI taxonomy Id: 754476
Other names: ATCC BAA-2433, DSM 25689, M. nitratireducenticrescens, Methylophaga nitratireducenticrescens Villeneuve et al. 2013, Methylophaga sp. GP59, Methylophaga sp. JAM1, strain JAM1
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