STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7A_858Sulfur oxidation protein SoxY. (162 aa)    
Predicted Functional Partners:
SoxZ
PFAM: Sulphur oxidation protein SoxZ.
 
 
 0.999
Q7A_619
PFAM: Sulphur oxidation protein SoxZ.
  
  
  0.912
cysD
Sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit.
     
 0.906
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.900
Q7A_857
Peptidase M48; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
       0.786
Q7A_860
Methanol utilization control sensor protein moxY; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
       0.773
Q7A_861
Two component transcriptional regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
       0.773
Q7A_2824
Sulfide dehydrogenase (flavocytochrome C) flavoprotein chain precursor; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding.
 
   
 0.729
Q7A_855
NADH dehydrogenase.
 
     0.656
Q7A_856
Rhodanese-like domain protein; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
     
 0.599
Your Current Organism:
Methylophaga nitratireducenticrescens
NCBI taxonomy Id: 754476
Other names: ATCC BAA-2433, DSM 25689, M. nitratireducenticrescens, Methylophaga nitratireducenticrescens Villeneuve et al. 2013, Methylophaga sp. GP59, Methylophaga sp. JAM1, strain JAM1
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