Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Q7C_2585Alkaline phosphatase; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Haemolysin-type calcium binding protein related domain; Putative Ig domain. (2717 aa)    
Predicted Functional Partners:
Q7C_2582
ABC-type bacteriocin/lantibiotic exporters peptidase domain protein; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ABC transporter, HlyB family.
 
  
 0.894
Q7C_2583
PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family.
 
  
 0.857
Q7C_2584
Hypothetical protein.
       0.776
Q7C_2575
Hypothetical protein.
 
     0.711
Q7C_133
PFAM: Protein of unknown function (DUF330).
  
     0.696
Q7C_704
ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: type I secretion system ATPase, LssB family.
 
  
 0.653
Q7C_1276
Molecular chaperone; PFAM: Flagellar hook-length control protein FliK.
  
    0.648
Q7C_2266
PilZ domain-containing protein; PFAM: PilZ domain.
  
     0.632
Q7C_2596
Soluble lytic murein transglycosylase-like protein; PFAM: Transglycosylase SLT domain.
  
     0.630
Q7C_1581
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase.
  
     0.617
Your Current Organism:
Methylophaga frappieri
NCBI taxonomy Id: 754477
Other names: ATCC BAA-2434, DSM 25690, M. frappieri, Methylophaga frappieri Villeneuve et al. 2013, Methylophaga sp. JAM7, strain JAM7
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