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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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[Homology]
Score
Q7C_960Type IV secretion system protein VirD4; PFAM: TraG/TraD family. (671 aa)    
Predicted Functional Partners:
Q7C_962
Conjugative transfer protein TrbB; PFAM: Type II/IV secretion system protein; TIGRFAM: P-type conjugative transfer ATPase TrbB.
 
   
 0.962
Q7C_961
PFAM: Ribbon-helix-helix protein, copG family.
 
     0.959
Q7C_969
PFAM: Bacterial conjugation TrbI-like protein.
 
 
 
 0.920
Q7C_968
PFAM: Conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG.
 
   
 0.905
Q7C_965
TIGRFAM: P-type conjugative transfer protein TrbJ.
 
   
 0.894
Q7C_963
Conjugative transfer protein TrbD; PFAM: Type IV secretory pathway, VirB3-like protein.
 
     0.892
Q7C_966
PFAM: TrbL/VirB6 plasmid conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbL.
 
   
 0.892
Q7C_967
Conjugative transfer protein TrbF; PFAM: VirB8 protein.
 
     0.886
Q7C_970
Uncharacterized conserved small protein; PFAM: Protein of unknown function (DUF2274).
 
     0.881
Q7C_964
Conjugative transfer protein TrbE; PFAM: CagE, TrbE, VirB family, component of type IV transporter system; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family.
 
  
 0.871
Your Current Organism:
Methylophaga frappieri
NCBI taxonomy Id: 754477
Other names: ATCC BAA-2434, DSM 25690, M. frappieri, Methylophaga frappieri Villeneuve et al. 2013, Methylophaga sp. JAM7, strain JAM7
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