STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68590.1Formiminotransferase-cyclodeaminase; KEGG: ctc:CTC02303 1.6e-27 formiminotetrahydrofolate cyclodeaminase K01746. (193 aa)    
Predicted Functional Partners:
KXB65647.1
KEGG: csh:Closa_2452 9.0e-215 homocysteine S-methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.898
fhs
KEGG: ccb:Clocel_3784 3.9e-191 Formate--tetrahydrofolate ligase K01938; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.887
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
     
 0.871
purD
KEGG: faa:HMPREF0389_00494 0. phosphoribosylformylglycinamidine synthase; K01952 phosphoribosylformylglycinamidine synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the GARS family.
     
 0.865
KXB66636.1
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; KEGG: cbm:CBF_1227 6.9e-50 folD; methylenetetrahydrofolate dehydrogenase K01491; Psort location: Cytoplasmic, score: 9.97.
    
 0.861
KXB65558.1
KEGG: aoe:Clos_2263 6.9e-27 5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase; Psort location: Cytoplasmic, score: 8.96.
    
 0.835
KXB68591.1
Phenazine biosynthesis protein, PhzF family; KEGG: nde:NIDE2777 3.0e-26 yddE; isomerase K06998; Psort location: Cytoplasmic, score: 9.97.
 
    0.823
KXB68593.1
Sporulation initiation inhibitor protein Soj; KEGG: rru:Rru_A3627 3.6e-60 chromosome segregation ATPase K03496; Psort location: Cytoplasmic, score: 8.96.
     
 0.817
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
    
 0.814
KXB68592.1
Putative stage 0 sporulation protein J; KEGG: pub:SAR11_0354 3.1e-38 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.
       0.810
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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