STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68423.1Cobalt transport protein; KEGG: bya:BANAU_0146 4.3e-57 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00. (270 aa)    
Predicted Functional Partners:
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  0.998
ecfA-2
Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  0.998
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.872
KXB66664.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   0.843
KXB66814.1
BioY family protein; KEGG: lml:lmo4a_0615 4.0e-15 BioY family protein K03523; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.839
KXB68393.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
   0.807
KXB68457.1
Hypothetical protein; KEGG: lml:lmo4a_0615 0.00052 BioY family protein K03523; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.781
KXB68421.1
Protein RarD; KEGG: apb:SAR116_2175 2.1e-39 RarD protein, DMT superfamily transporter K05786; Psort location: CytoplasmicMembrane, score: 10.00.
       0.655
KXB66068.1
KEGG: snc:HMPREF0837_11109 3.3e-75 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.99.
 
  0.650
KXB64709.1
ABC transporter, ATP-binding protein; KEGG: ssg:Selsp_1191 4.6e-69 Monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 7.88.
 
  0.640
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.