STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68429.1Putative protein ArsC; KEGG: apr:Apre_0355 5.8e-46 protein tyrosine phosphatase; K03741 arsenate reductase; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (146 aa)    
Predicted Functional Partners:
KXB68428.1
KEGG: msp:Mspyr1_53740 4.2e-43 arsenical-resistance protein; K03325 arsenite transporter, ACR3 family; K03741 arsenate reductase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.957
KXB68430.1
Putative arsenite-transporting ATPase; KEGG: dsy:DSY4598 7.7e-209 hypothetical protein; K01551 arsenite-transporting ATPase; Psort location: Cytoplasmic, score: 8.96.
    
 0.953
KXB68432.1
Putative arsenical resistance operon repressor; KEGG: rru:Rru_A1450 4.5e-08 ArsR family transcriptional regulator K03741; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.833
KXB68431.1
KEGG: ctu:Ctu_3p00370 4.8e-26 arsD; Arsenical resistance operon trans-acting repressor arsD; Psort location: Cytoplasmic, score: 8.96.
     
 0.811
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
   0.647
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.615
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.575
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
    
   0.567
udk
Uridine kinase; KEGG: bbe:BBR47_19080 5.3e-68 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 9.97.
  
  0.523
KXB65571.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  0.510
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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