STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68174.1Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.9e-77 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00. (505 aa)    
Predicted Functional Partners:
KXB67284.1
Cation transport protein; KEGG: ssr:SALIVB_0283 8.2e-79 DNA polymerase IV K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.854
KXB66598.1
KEGG: aoe:Clos_1975 3.6e-101 TrkH family potassium uptake protein K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.854
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 2.6e-13 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
 
  
 0.849
KXB68175.1
Ligand-binding protein, receptor family; KEGG: apb:SAR116_0346 3.3e-15 high affinity branched-chain amino acid amino acid ABC transporter substrate-binding protein K01999; Psort location: Periplasmic, score: 9.44.
     
 0.795
KXB68176.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
purD
KEGG: faa:HMPREF0389_00494 0. phosphoribosylformylglycinamidine synthase; K01952 phosphoribosylformylglycinamidine synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the GARS family.
 
  
 0.674
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.637
KXB65227.1
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.637
KXB65111.1
Putative ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.593
KXB67298.1
Putative NADH oxidase; KEGG: clj:CLJU_c30750 9.6e-124 enoate reductase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.567
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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