STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68176.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (179 aa)    
Predicted Functional Partners:
KXB68174.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.9e-77 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB68175.1
Ligand-binding protein, receptor family; KEGG: apb:SAR116_0346 3.3e-15 high affinity branched-chain amino acid amino acid ABC transporter substrate-binding protein K01999; Psort location: Periplasmic, score: 9.44.
       0.773
KXB68173.1
Putative lysine-arginine-ornithine-binding periplasmic protein; KEGG: ebe:B21_02195 4.7e-28 argT; argT, subunit of lysine/arginine/ornithine ABC Transporter K10013; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 3 family.
       0.527
KXB68171.1
KEGG: thl:TEH_23830 3.9e-47 putative amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.485
KXB68172.1
ABC transporter, permease protein; KEGG: ebe:B21_00794 2.3e-28 glnP; glnP, subunit of glutamine ABC transporter K10037; Psort location: CytoplasmicMembrane, score: 10.00.
       0.485
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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