STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68181.1Putative DNA replication protein DnaC; KEGG: apb:SAR116_1558 0.00013 ATPase K02313; Psort location: Cytoplasmic, score: 8.96. (327 aa)    
Predicted Functional Partners:
KXB65321.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
 
 
 0.970
KXB68182.1
DnaD domain protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.958
KXB68183.1
Acetyltransferase, GNAT family; KEGG: bmd:BMD_3701 1.1e-12 spermidine N1-acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
    0.842
KXB68184.1
Putative DEAD-box ATP-dependent RNA helicase CshA; KEGG: tep:TepRe1_0277 2.6e-137 DEAD/DEAH box helicase domain-containing protein; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97.
       0.620
dnaA
Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
 
 
 0.617
KXB65027.1
six-Cys-in-45 modification radical SAM protein; KEGG: mcj:MCON_2732 2.6e-13 anaerobic sulfatase-maturating protein K06871; Psort location: Cytoplasmic, score: 8.96.
  
     0.536
KXB68180.1
Aminotransferase, class I/II; KEGG: cdc:CD196_1202 1.3e-110 aspartate aminotransferase; K00812 aspartate aminotransferase; Psort location: Cytoplasmic, score: 9.97.
       0.525
KXB65178.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.524
KXB68186.1
Toxic anion resistance protein TelA; KEGG: edi:EDI_076200 1.4e-05 GRIP1-associated protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the TelA family.
 
     0.508
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.501
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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