STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68183.1Acetyltransferase, GNAT family; KEGG: bmd:BMD_3701 1.1e-12 spermidine N1-acetyltransferase; Psort location: Cytoplasmic, score: 8.96. (187 aa)    
Predicted Functional Partners:
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.885
KXB65227.1
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
  0.885
KXB68182.1
DnaD domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.843
KXB68181.1
Putative DNA replication protein DnaC; KEGG: apb:SAR116_1558 0.00013 ATPase K02313; Psort location: Cytoplasmic, score: 8.96.
 
    0.842
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
 
  0.814
KXB68180.1
Aminotransferase, class I/II; KEGG: cdc:CD196_1202 1.3e-110 aspartate aminotransferase; K00812 aspartate aminotransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.651
KXB68184.1
Putative DEAD-box ATP-dependent RNA helicase CshA; KEGG: tep:TepRe1_0277 2.6e-137 DEAD/DEAH box helicase domain-containing protein; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97.
     
 0.639
KXB67302.1
Phosphate acetyltransferase; KEGG: llm:llmg_0763 1.8e-99 eutD; phosphotransacetylase K00625; Psort location: Cytoplasmic, score: 9.97.
    
 0.626
KXB67064.1
KEGG: apb:SAR116_1706 1.6e-11 DNA-binding protein; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.618
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.577
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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