STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68189.1KEGG: mct:MCR_0505 6.9e-82 amino acid transport protein K03310; Psort location: CytoplasmicMembrane, score: 10.00. (465 aa)    
Predicted Functional Partners:
KXB68188.1
Na/Pi-cotransporter II-like protein; KEGG: ssr:SALIVB_1586 1.4e-97 pgk; phosphoglycerate kinase K03324; Psort location: CytoplasmicMembrane, score: 10.00.
       0.487
KXB68190.1
Hydrolase, NUDIX family; KEGG: lmf:LMOf2365_0384 1.3e-14 MutT/nudix family protein; K01554; Psort location: Cytoplasmic, score: 8.96.
       0.446
KXB68174.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.9e-77 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.440
KXB68187.1
Hypothetical protein.
       0.420
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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