STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
atpDV-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (205 aa)    
Predicted Functional Partners:
atpB
ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.999
atpA
ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
KXB68194.1
Hypothetical protein; KEGG: cst:CLOST_2317 2.5e-13 hypothetical protein; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 8.96.
  
 0.999
KXB68195.1
Hypothetical protein; KEGG: fma:FMG_1168 1.3e-14 V-type sodium ATP synthase subunit F; K02122 V-type H+-transporting ATPase subunit F; Psort location: Cytoplasmic, score: 8.96.
 
 0.999
KXB68196.1
ATP synthase subunit C; KEGG: fma:FMG_1169 8.6e-36 V-type sodium ATP synthase subunit K; K02124 V-type H+-transporting ATPase subunit K; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the V-ATPase proteolipid subunit family.
 
 0.999
KXB68197.1
V-type ATPase subunit family protein; KEGG: fma:FMG_1170 3.7e-138 V-type sodium ATP synthase subunit I; K02123 V-type H+-transporting ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
KXB68198.1
Hypothetical protein; KEGG: fma:FMG_1171 9.2e-32 V-type sodium ATP synthase subunit C; K02119 V-type H+-transporting ATPase subunit C; Psort location: Cytoplasmic, score: 8.96.
 
 0.999
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.988
KXB68199.1
Hypothetical protein; KEGG: dya:Dyak_GE16349 0.0035 GE16349 gene product from transcript GE16349-RA; K14437 chromodomain-helicase-DNA-binding protein 7; Psort location: Cytoplasmic, score: 8.96.
       0.716
KXB68190.1
Hydrolase, NUDIX family; KEGG: lmf:LMOf2365_0384 1.3e-14 MutT/nudix family protein; K01554; Psort location: Cytoplasmic, score: 8.96.
  
    0.644
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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