STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (329 aa)    
Predicted Functional Partners:
KXB67215.1
Aspartate kinase; KEGG: cst:CLOST_1413 5.9e-108 aspartokinase K00928; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartokinase family.
 
 
 0.994
KXB68201.1
KEGG: cle:Clole_1610 9.7e-60 homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
 0.987
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.868
KXB65227.1
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.868
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
 
 0.859
pgk
KEGG: fma:FMG_0792 1.8e-106 phosphoglycerate kinase; K00927 phosphoglycerate kinase; Psort location: Cytoplasmic, score: 9.97.
  
 0.854
KXB64912.1
Hypothetical protein; KEGG: smh:DMIN_00070 0.0015 DNA gyrase subunit A K02469; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.809
KXB68204.1
Amidohydrolase; KEGG: sap:Sulac_0605 1.1e-72 amidohydrolase; Psort location: Cytoplasmic, score: 8.96.
  
    0.794
KXB68203.1
Hydrolase, carbon-nitrogen family; KEGG: cha:CHAB381_1793 1.5e-45 hydrolase in agr operon (ORF 5) K08590; Psort location: Cytoplasmic, score: 9.97.
       0.775
KXB65607.1
KEGG: txy:Thexy_0012 5.6e-16 acetolactate synthase small subunit; K01653 acetolactate synthase I/III small subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.726
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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