STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68215.1R-phenyllactate dehydratase activator; KEGG: afn:Acfer_1816 5.8e-69 CoA-substrate-specific enzyme activase. (256 aa)    
Predicted Functional Partners:
KXB68213.1
Putative R-phenyllactate dehydratase, small subunit; KEGG: cbh:CLC_2140 4.5e-78 R-2-hydroxyglutaryl-CoA dehydratase subunit beta; Psort location: Cytoplasmic, score: 8.96.
 
 0.987
KXB68214.1
KEGG: clo:HMPREF0868_0586 3.1e-134 fldB; R-phenyllactate dehydratase medium subunit; Psort location: Cytoplasmic, score: 8.96.
 
 0.982
KXB68362.1
2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: awo:Awo_c08270 6.3e-120 hgdB; 2-hydroxyglutaryl-CoA dehydratase beta subunit HgdB; Psort location: Cytoplasmic, score: 8.96.
 0.934
KXB68216.1
KEGG: clo:HMPREF0868_0592 3.1e-166 fldA; cinnamoyl-CoA:phenyllactate CoA-transferase K13607; Psort location: Cytoplasmic, score: 9.97; Belongs to the CoA-transferase III family.
 
     0.754
KXB68212.1
4-phosphoerythronate dehydrogenase; KEGG: awo:Awo_c16070 1.0e-55 gyaR; glyoxylate reductase GyaR; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.497
KXB68217.1
KEGG: apb:SAR116_0310 4.3e-07 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
       0.470
KXB68210.1
Aminotransferase, class I/II; KEGG: med:MELS_1033 3.5e-110 aminotransferase; K11358 aspartate aminotransferase; Psort location: Cytoplasmic, score: 9.97.
 
     0.449
KXB68211.1
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
       0.411
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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