STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68236.1KEGG: apb:SAR116_1094 4.9e-11 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00. (190 aa)    
Predicted Functional Partners:
KXB68238.1
KEGG: apb:SAR116_1094 4.0e-12 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.914
KXB68237.1
Hypothetical protein; KEGG: ctc:CTC01841 4.7e-28 PTS system, fructose-specific IIBC component K07035; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.559
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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