STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68253.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (138 aa)    
Predicted Functional Partners:
KXB68254.1
Nitroreductase family protein; KEGG: apr:Apre_0996 6.0e-67 nitroreductase; K00540; Psort location: Cytoplasmic, score: 8.96; Belongs to the flavin oxidoreductase frp family.
       0.773
KXB68255.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB68256.1
Hypothetical protein.
       0.588
rlmH
rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.588
KXB68258.1
Redoxin family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
       0.588
KXB68252.1
Transporter, major facilitator family protein; KEGG: ssr:SALIVB_1450 0.0017 coaE; Dephospho-CoA kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.465
KXB68259.1
Hypothetical protein; KEGG: bya:BANAU_3930 1.2e-09 Carbamoyl-phosphate synthase pyrimidine-specific large chain; Psort location: Cytoplasmic, score: 8.96.
       0.406
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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