STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68264.1Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids. (458 aa)    
Predicted Functional Partners:
KXB68265.1
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
 
    
0.442
KXB68262.1
KEGG: efl:EF62_2555 3.9e-24 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein; Psort location: Periplasmic, score: 9.44.
       0.435
KXB68263.1
Na+/H+ antiporter NhaC; KEGG: ppo:PPM_1266 0.0041 bglP2; PTS system, beta-glucosides-specific IIA component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
       0.435
KXB68266.1
Hypothetical protein.
       0.421
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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