STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68271.1Hypothetical protein; KEGG: cqu:CpipJ_CPIJ009638 8.1e-16 enolase-phosphatase e-1; K09880 enolase-phosphatase E1; Psort location: Cytoplasmic, score: 9.97. (250 aa)    
Predicted Functional Partners:
KXB68270.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB68269.1
KEGG: clc:Calla_1127 5.7e-78 cysteine desulfurase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
       0.639
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.607
KXB68267.1
MaoC-like protein; KEGG: sax:USA300HOU_0030 1.6e-18 maoC; acyl dehydratase MaoC; Psort location: Cytoplasmic, score: 8.96.
       0.598
KXB68272.1
KEGG: apb:SAR116_1449 0.0070 membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.473
KXB68265.1
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
       0.428
KXB68266.1
Hypothetical protein.
       0.428
KXB68273.1
Thioesterase family protein; KEGG: cef:CE0666 4.6e-05 phenylacetic acid degradation protein; K02614 acyl-CoA thioesterase; Psort location: Cytoplasmic, score: 8.96.
       0.402
KXB68274.1
Hypothetical protein; KEGG: rop:ROP_70420 5.1e-06 thioesterase.
       0.402
dinB
Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.402
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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